STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000008547annotation not available (296 aa)    
Predicted Functional Partners:
RLF
Zinc finger protein Rlf.
      
 0.766
FBXL17
F-box/LRR-repeat protein 17.
    
 
 0.701
ENSEEUP00000006122
annotation not available
      
 0.652
KLHL7
Kelch-like protein 7 isoform X1.
      
 0.648
ENSEEUP00000000551
annotation not available
      
 0.635
PJA2
E3 ubiquitin-protein ligase Praja-2.
      
 0.534
ENSEEUP00000003345
annotation not available
      
 0.499
NEURL1
E3 ubiquitin-protein ligase NEURL1 isoform X1.
      
 0.487
SRBD1
S1 RNA-binding domain-containing protein 1.
      
 0.476
PCCB
propionyl-CoA carboxylase beta chain, mitochondrial.
      
 0.453
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.