Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSEEUP00000003951 | MED14 | ENSEEUP00000003951 | ENSEEUP00000012929 | annotation not available | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.995 |
ENSEEUP00000003951 | MED17 | ENSEEUP00000003951 | ENSEEUP00000006416 | annotation not available | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
ENSEEUP00000003951 | PTGIS | ENSEEUP00000003951 | ENSEEUP00000013113 | annotation not available | Prostacyclin synthase; Catalyzes the isomerization of prostaglandin H2 to prostacyclin (= prostaglandin I2); Belongs to the cytochrome P450 family. | 0.520 |
ENSEEUP00000003951 | TBXAS1 | ENSEEUP00000003951 | ENSEEUP00000008568 | annotation not available | thromboxane-A synthase; Belongs to the cytochrome P450 family. | 0.836 |
ENSEEUP00000008033 | FAM213B | ENSEEUP00000008033 | ENSEEUP00000009099 | annotation not available | Prostamide/prostaglandin F synthase isoform X4. | 0.867 |
ENSEEUP00000008033 | HPGDS | ENSEEUP00000008033 | ENSEEUP00000006695 | annotation not available | Hematopoietic prostaglandin D synthase isoform X1. | 0.923 |
ENSEEUP00000008033 | PTGES3 | ENSEEUP00000008033 | ENSEEUP00000006398 | annotation not available | Prostaglandin E synthase 3 isoform X1. | 0.966 |
ENSEEUP00000008033 | PTGIS | ENSEEUP00000008033 | ENSEEUP00000013113 | annotation not available | Prostacyclin synthase; Catalyzes the isomerization of prostaglandin H2 to prostacyclin (= prostaglandin I2); Belongs to the cytochrome P450 family. | 0.923 |
ENSEEUP00000008033 | PTGS1 | ENSEEUP00000008033 | ENSEEUP00000007783 | annotation not available | Prostaglandin G/H synthase 1. | 0.932 |
ENSEEUP00000008033 | PTGS2 | ENSEEUP00000008033 | ENSEEUP00000012842 | annotation not available | Prostaglandin G/H synthase 2. | 0.932 |
ENSEEUP00000008033 | TBXAS1 | ENSEEUP00000008033 | ENSEEUP00000008568 | annotation not available | thromboxane-A synthase; Belongs to the cytochrome P450 family. | 0.932 |
FAM213B | ENSEEUP00000008033 | ENSEEUP00000009099 | ENSEEUP00000008033 | Prostamide/prostaglandin F synthase isoform X4. | annotation not available | 0.867 |
FAM213B | HPGDS | ENSEEUP00000009099 | ENSEEUP00000006695 | Prostamide/prostaglandin F synthase isoform X4. | Hematopoietic prostaglandin D synthase isoform X1. | 0.911 |
FAM213B | PTGS1 | ENSEEUP00000009099 | ENSEEUP00000007783 | Prostamide/prostaglandin F synthase isoform X4. | Prostaglandin G/H synthase 1. | 0.872 |
FAM213B | PTGS2 | ENSEEUP00000009099 | ENSEEUP00000012842 | Prostamide/prostaglandin F synthase isoform X4. | Prostaglandin G/H synthase 2. | 0.881 |
FAM213B | TBXAS1 | ENSEEUP00000009099 | ENSEEUP00000008568 | Prostamide/prostaglandin F synthase isoform X4. | thromboxane-A synthase; Belongs to the cytochrome P450 family. | 0.863 |
HPGDS | ENSEEUP00000008033 | ENSEEUP00000006695 | ENSEEUP00000008033 | Hematopoietic prostaglandin D synthase isoform X1. | annotation not available | 0.923 |
HPGDS | FAM213B | ENSEEUP00000006695 | ENSEEUP00000009099 | Hematopoietic prostaglandin D synthase isoform X1. | Prostamide/prostaglandin F synthase isoform X4. | 0.911 |
HPGDS | PTGES3 | ENSEEUP00000006695 | ENSEEUP00000006398 | Hematopoietic prostaglandin D synthase isoform X1. | Prostaglandin E synthase 3 isoform X1. | 0.917 |
HPGDS | PTGIS | ENSEEUP00000006695 | ENSEEUP00000013113 | Hematopoietic prostaglandin D synthase isoform X1. | Prostacyclin synthase; Catalyzes the isomerization of prostaglandin H2 to prostacyclin (= prostaglandin I2); Belongs to the cytochrome P450 family. | 0.895 |
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