STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103128889Protein NPAT. (1411 aa)    
Predicted Functional Partners:
HINFP
Histone H4 transcription factor.
    
 
 0.796
POGLUT3
KDEL motif-containing protein 2.
    
 
 0.744
LSM10
U7 snRNA-associated Sm-like protein LSm10 isoform X1.
      
 0.740
CDK2
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
    
 0.668
ZNF143
Zinc finger protein 143.
   
 0.663
KAT6B
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.647
MYSM1
Histone H2A deubiquitinase MYSM1.
    
 0.633
ZNF687
Zinc finger protein 687.
    
 0.631
ARID4A
AT-rich interactive domain-containing protein 4A.
   
 0.627
ADGRA3
Adhesion G protein-coupled receptor A3.
    
 0.626
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.