STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TACC1Transforming acidic coiled-coil-containing protein 1 isoform X2. (585 aa)    
Predicted Functional Partners:
CCDC125
Coiled-coil domain containing 125.
      
 0.767
TACC2
Transforming acidic coiled-coil-containing protein 2 isoform X2.
    
 
0.746
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.739
RASL11B
Ras-like protein family member 11B.
    
 0.716
CKAP5
Cytoskeleton-associated protein 5.
    
 
 0.705
PPP6C
Serine/threonine-protein phosphatase.
    
 0.625
PLEKHA2
Pleckstrin homology domain-containing family A member 2.
    
 0.576
CCDC88A
Girdin.
    
 
 0.576
DIABLO
Diablo homolog, mitochondrial isoform X1.
      
 0.575
ENSEEUP00000001563
annotation not available
      
 0.574
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.