STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D19TBC1 domain family member 19 isoform X1. (525 aa)    
Predicted Functional Partners:
TBC1D10C
Carabin.
      
 0.790
TBC1D13
TBC1 domain family member 13 isoform X1.
      
 0.770
ENSEEUP00000005224
annotation not available
      
 0.768
TBC1D10B
TBC1 domain family member 10B.
      
 0.767
TBC1D22B
TBC1 domain family member 22B.
      
 0.767
TTLL1
Probable tubulin polyglutamylase TTLL1 isoform X2.
   
 
 0.767
TBC1D10A
TBC1 domain family member 10A.
      
 0.766
TBC1D7
TBC1 domain family member 7 isoform X1.
      
 0.765
EVI5
Ecotropic viral integration site 5 protein homolog.
      
 0.753
ENSEEUP00000000806
annotation not available
      
 0.748
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.