STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRA2BTransformer-2 protein homolog beta isoform X2. (248 aa)    
Predicted Functional Partners:
SRSF3
Serine/arginine-rich splicing factor 3.
   
 0.996
SRSF7
Serine/arginine-rich splicing factor 7 isoform X1.
   
 0.994
SRSF1
Serine/arginine-rich splicing factor 1 isoform X2.
   
 0.992
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.979
SRSF10
Serine/arginine-rich splicing factor 10 isoform X1.
   
0.972
SRSF6
Serine and arginine rich splicing factor 6.
   
0.963
SRSF4
Serine/arginine-rich splicing factor 4 isoform X2.
   
0.963
SRSF2
Serine/arginine-rich splicing factor 2 isoform X1.
   
0.959
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.
  
 0.938
TRA2A
Transformer-2 protein homolog alpha isoform X1.
  
 
0.937
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.