STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZD8PDZ domain-containing protein 8. (863 aa)    
Predicted Functional Partners:
ZFYVE27
Protrudin isoform X1.
      
 0.807
ENSEEUP00000009493
annotation not available
    
 
 0.770
NSD3
Histone-lysine N-methyltransferase NSD3 isoform X1.
      
 0.769
MON1A
Vacuolar fusion protein MON1 homolog A.
      
 0.767
VAPA
LOW QUALITY PROTEIN: vesicle-associated membrane protein-associated protein A.
    
 
 0.746
ACBD5
Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.
      
 0.741
ENSEEUP00000004103
annotation not available
    
  0.702
THAP6
THAP domain-containing protein 6 isoform X1.
    
  0.600
THAP7
THAP domain-containing protein 7.
    
  0.600
TEX2
Testis-expressed sequence 2 protein isoform X1.
   
  
 0.588
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.