STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP58Nucleoporin p58/p45 isoform X1. (561 aa)    
Predicted Functional Partners:
ENSEEUP00000003238
annotation not available
   
 0.999
NUP93
Nucleoporin 93.
   
 0.998
ENSEEUP00000009375
annotation not available
   
 0.996
RANBP2
E3 SUMO-protein ligase RanBP2 isoform X1.
   
 0.993
NUP155
Nuclear pore complex protein Nup155 isoform X1.
   
 0.989
NUP133
LOW QUALITY PROTEIN: nuclear pore complex protein Nup133.
   
 0.988
NUP214
Nuclear pore complex protein Nup214.
   
 0.984
NUP188
Nucleoporin NUP188 homolog.
    
 0.982
NUP205
Nucleoporin 205.
   
 0.976
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.974
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.