STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTLC3Serine palmitoyltransferase 3. (521 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase 1 isoform X2.
  
0.994
ENSEEUP00000012966
annotation not available
     
 0.948
SPTSSB
Serine palmitoyltransferase small subunit B.
    
 0.948
SDS
L-serine dehydratase/L-threonine deaminase.
   
 0.887
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.886
SRR
Serine racemase isoform X1.
   
 0.885
SPTSSA
Serine palmitoyltransferase small subunit A.
    
 0.880
ENSEEUP00000007870
annotation not available
    
 0.871
SPTLC2
Serine palmitoyltransferase 2-like.
  
  
 
0.865
ORMDL3
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.825
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.