STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLL12Tubulin--tyrosine ligase-like protein 12. (640 aa)    
Predicted Functional Partners:
PBDC1
Protein PBDC1.
    
   0.702
ENSEEUP00000004054
annotation not available
    
 
 0.672
ENSEEUP00000003063
annotation not available
      
 0.652
AGBL5
Cytosolic carboxypeptidase-like protein 5.
      
 0.636
ALDH6A1
Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial.
 
   
  0.608
LRRFIP2
Leucine-rich repeat flightless-interacting protein 2 isoform X1.
      
 0.599
EEF1AKMT1
EEF1A lysine methyltransferase 1; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
    
   0.581
EEF1A1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
   0.578
ENSEEUP00000004257
annotation not available
    
   0.578
DNAJB13
dnaJ homolog subfamily B member 13.
    
   0.574
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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