STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC61A1SEC61 translocon alpha 1 subunit. (444 aa)    
Predicted Functional Partners:
SEC63
Translocation protein SEC63 homolog.
   
 
 0.999
ENSEEUP00000007429
annotation not available
    
 
 0.990
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.990
ENSEEUP00000010485
annotation not available
  
 
 0.986
ENSEEUP00000010642
annotation not available
  
 
 0.986
ENSEEUP00000012140
annotation not available
  
 0.986
RPS11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.983
ARL6IP1
ADP-ribosylation factor-like protein 6-interacting protein 1.
  
 
 0.983
RPS18
40S ribosomal protein S18 isoform X1; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.983
MRPS5
28S ribosomal protein S5, mitochondrial.
  
 0.983
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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