STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMYM3Zinc finger MYM-type containing 3. (1370 aa)    
Predicted Functional Partners:
ENSEEUP00000009969
annotation not available
   
 0.813
PGBD5
piggyBac transposable element-derived protein 5.
    
 
 0.793
ENSEEUP00000014511
annotation not available
    
 
 0.777
ZNF280D
Zinc finger protein 280D.
   
 0.772
HARBI1
Putative nuclease HARBI1.
      
 0.767
LENG1
Leukocyte receptor cluster member 1.
    
 
 0.732
ENSEEUP00000010821
annotation not available
   
 0.714
RFX8
DNA-binding protein RFX8.
      
 0.703
BBX
HMG box transcription factor BBX isoform X1.
   
 
 0.673
YIPF6
Protein YIPF.
    
 
 0.670
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.