STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA4Liprin-alpha-4 isoform X3. (1189 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis protein 2 isoform X2.
    
 0.950
CASK
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
    
 0.869
PTPRF
Receptor-type tyrosine-protein phosphatase F isoform X6.
    
 0.837
GIT1
ARF GTPase-activating protein GIT1 isoform X1.
    
 
 0.824
PTPRD
Receptor-type tyrosine-protein phosphatase delta isoform X3.
    
 0.792
ENSEEUP00000002228
annotation not available
   
 0.792
PPFIBP2
Liprin-beta-2 isoform X2.
   
0.792
ZNF831
Zinc finger protein 831.
      
 0.766
MPP6
MAGUK p55 subfamily member 6; Belongs to the MAGUK family.
    
 0.747
REP15
Rab15 effector protein.
   
 0.725
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.