STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBATAProtein TBATA. (310 aa)    
Predicted Functional Partners:
TMEM50B
Transmembrane protein 50B.
      
 0.647
PRSS16
Thymus-specific serine protease.
   
  
 0.608
PAXBP1
PAX3- and PAX7-binding protein 1 isoform X2.
      
 0.599
SLAIN2
SLAIN motif-containing protein 2 isoform X2.
      
 0.557
ENSEEUP00000005495
annotation not available
      
 0.506
SLC46A2
Thymic stromal cotransporter homolog.
   
  
 0.505
AKAP4
A-kinase anchoring protein 4.
      
 0.501
DST
Dystonin isoform X2.
      
 0.499
FOXN1
Forkhead box protein N1.
      
 0.495
SMIM19
Small integral membrane protein 19 isoform X1.
      
 0.495
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.