STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D9TBC1 domain family member 9. (1125 aa)    
Predicted Functional Partners:
ELMOD2
ELMO domain-containing protein 2.
      
 0.769
PJA2
E3 ubiquitin-protein ligase Praja-2.
      
 0.764
TBC1D2B
TBC1 domain family member 2B.
 
   
 0.741
RNF150
RING finger protein 150.
 
    
 0.730
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
   
 
  0.703
RAB25
Ras-related protein Rab-25.
    
 0.652
MEX3A
RNA-binding protein MEX3A.
      
 0.648
ENSEEUP00000003345
annotation not available
   
 0.585
UFM1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes.
      
 0.577
IGF2R
Cation-independent mannose-6-phosphate receptor.
   
 
  0.574
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.