STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107523328Zinc finger protein 709-like. (239 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
    
  0.710
ENSEEUP00000007878
annotation not available
    
  0.710
SUFU
SUFU negative regulator of hedgehog signaling.
   
  0.518
BARD1
BRCA1-associated RING domain protein 1.
    
  0.510
GTF3C3
General transcription factor 3C polypeptide 3.
    
 0.507
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1.
   
  0.496
DAP3
28S ribosomal protein S29, mitochondrial.
   
  0.495
SPOP
Speckle-type POZ protein.
   
  0.493
SPOPL
Speckle-type POZ protein-like isoform X1.
   
  0.493
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
   
  0.492
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.