STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX5Paired box protein Pax-5 isoform X1. (389 aa)    
Predicted Functional Partners:
ETS1
Protein C-ets-1 isoform X2.
   
 
 0.869
RUNX2
Runt-related transcription factor 2 isoform X2.
    
 0.789
IRF4
Interferon regulatory factor 4 isoform X1.
   
  
 0.735
LHX1
LIM/homeobox protein Lhx1.
    
 
 0.730
BCL6
B-cell lymphoma 6 protein.
      
 0.724
BACH2
Transcription regulator protein BACH2.
    
 
 0.720
GSC
Homeobox protein goosecoid.
    
 
 0.707
AICDA
Single-stranded DNA cytosine deaminase.
   
  
 0.661
CD19
B-lymphocyte antigen CD19.
   
  
 0.652
ETS2
Protein C-ets-2; Transcription factor; Belongs to the ETS family.
   
 
 0.642
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.