STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000011602annotation not available (1111 aa)    
Predicted Functional Partners:
UTP14A
U3 small nucleolar RNA-associated protein 14 homolog A isoform X1.
   
 0.992
WDR46
WD repeat-containing protein 46 isoform X1.
   
 0.980
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.979
DDX47
Probable ATP-dependent RNA helicase DDX47 isoform X1; Belongs to the DEAD box helicase family.
  
 0.977
ENSEEUP00000008634
annotation not available
   
 0.976
ENSEEUP00000013960
annotation not available
   
 0.976
DCAF13
DDB1- and CUL4-associated factor 13.
   
  0.974
EMG1
Ribosomal RNA small subunit methyltransferase NEP1 isoform X1.
   
 0.973
UTP20
UTP20 small subunit processome component.
   
  0.973
ENSEEUP00000008604
annotation not available
   
  0.973
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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