STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMED9Transmembrane emp24 domain-containing protein 9 isoform X1. (235 aa)    
Predicted Functional Partners:
TMED2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
0.979
TMED7-TICAM2
Uncharacterized protein LOC103112541; Belongs to the EMP24/GP25L family.
   
0.919
PMS1
PMS1 protein homolog 1 isoform X6.
      
 0.759
COPB1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.753
B4GALT7
Beta-1,4-galactosyltransferase 7.
 
 
  
 0.746
ENSEEUP00000004796
annotation not available
   
 0.733
SEC22A
Vesicle-trafficking protein SEC22a isoform X1; Belongs to the synaptobrevin family.
   
 0.733
ARFGAP2
ADP-ribosylation factor GTPase-activating protein 2 isoform X3.
    
 0.724
STX5
Syntaxin-5 isoform X2; Belongs to the syntaxin family.
   
 0.716
TMED5
Transmembrane emp24 domain-containing protein 5 isoform X1.
    
 
 0.709
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.