STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A4Long-chain fatty acid transport protein 4. (643 aa)    
Predicted Functional Partners:
SLC27A1
Long-chain fatty acid transport protein 1.
  
  
0.871
BBS7
Bardet-Biedl syndrome 7 protein.
    
 0.864
BBS9
Protein PTHB1.
   
 0.860
SCP2
Sterol carrier protein 2.
   
 
 0.855
TTC8
Tetratricopeptide repeat protein 8 isoform X2.
    
 0.841
SLC27A2
Very long-chain acyl-CoA synthetase isoform X1.
  
  
 
0.836
PNPLA1
Patatin-like phospholipase domain-containing protein 1.
    
 
 0.786
NIPAL4
Magnesium transporter NIPA4.
    
 
 0.785
KIFC2
Kinesin-like protein KIFC2.
    
 0.768
KIFC3
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.768
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.