STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND4CDENN domain-containing protein 4C. (1619 aa)    
Predicted Functional Partners:
RAB8B
Ras-related protein Rab-8B.
    
 0.761
ANKFY1
Rabankyrin-5.
      
 0.740
DENND1A
DENN domain-containing protein 1A isoform X1.
    
 
0.684
AVL9
Late secretory pathway protein AVL9 homolog.
      
 0.683
DENND5A
DENN domain-containing protein 5A isoform X1.
    
 
0.674
RIC1
RAB6A-GEF complex partner protein 1 isoform X1.
      
 0.635
VMP1
Vacuole membrane protein 1.
      
 0.635
RAB9B
Ras-related protein Rab-9B.
      
 0.547
DENND3
DENN domain-containing protein 3.
      
 0.530
RHOBTB3
Rho-related BTB domain-containing protein 3.
    
 
 0.530
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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