STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP40Rho GTPase-activating protein 40. (279 aa)    
Predicted Functional Partners:
LOC103112038
Teneurin-2-like isoform X1.
   
  
 0.703
VSTM2L
V-set and transmembrane domain-containing protein 2-like protein.
      
 0.645
KIAA1755
Uncharacterized protein KIAA1755 homolog.
      
 0.616
TNS1
Tensin 1.
    
 
 0.587
TNS3
Tensin-3 isoform X1.
    
 
 0.587
ENSEEUP00000008139
annotation not available
    
 
 0.587
TNS2
Tensin-2 isoform X2.
    
 
 0.587
DLGAP4
Disks large-associated protein 4 isoform X1.
      
 0.581
RHOB
Rho-related GTP-binding protein RhoB isoform X1.
   
 0.555
RHOA
Transforming protein RhoA.
   
 0.555
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.