STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX15Protein SOX-15. (232 aa)    
Predicted Functional Partners:
POU5F1
POU domain protein.
    
 0.944
ENSEEUP00000012432
annotation not available
    
 0.852
CTNNB1
Catenin beta-1.
    
 0.789
JUP
Junction plakoglobin.
    
 0.752
SOX10
Transcription factor SOX-10.
   
0.735
RUNX2
Runt-related transcription factor 2 isoform X2.
   
 0.732
POU2F1
POU domain protein.
   
 0.702
POU1F1
POU domain protein.
   
 0.674
SALL4
Sal-like protein 4 isoform X1.
   
 0.669
ENSEEUP00000004103
annotation not available
    
 0.653
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.