STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRTAP8-1Keratin-associated protein 8-1. (62 aa)    
Predicted Functional Partners:
KRTAP24-1
Keratin-associated protein 24-1.
   
 
 0.876
HAMP
Hepcidin.
   
    0.762
OR51A7
Olfactory receptor.
   
    0.734
LOC103120617
Keratin-associated protein 3-3.
   
 
 0.708
LOC103120619
Keratin-associated protein 3-1.
   
 
 0.708
H2BC1
Histone H2B; Belongs to the histone H2B family.
   
    0.692
LOC103116073
Histone H2B; Belongs to the histone H2B family.
   
    0.692
KRTAP15-1
Keratin-associated protein 15-1.
   
 
 0.656
LOC103118354
Keratin-associated protein 13-1-like.
   
 
 0.656
LOC103118355
Keratin-associated protein 13-1-like.
   
 
 0.656
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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