STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000012467annotation not available (297 aa)    
Predicted Functional Partners:
SLC36A2
Proton-coupled amino acid transporter 2.
    
 
 0.742
LAMTOR1
Ragulator complex protein LAMTOR1.
    
 0.690
LAMTOR4
Ragulator complex protein LAMTOR4 isoform X2.
    
 0.688
LAMTOR5
Ragulator complex protein LAMTOR5.
    
 0.687
RRAGC
Ras-related GTP-binding protein C isoform X1.
    
 0.663
RIMS2
Regulating synaptic membrane exocytosis protein 2 isoform X2.
   
 
 0.624
FTSJ1
Putative tRNA (Cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
   
  
 0.611
RRAGB
Ras-related GTP-binding protein B.
   
 0.595
RRAGA
Ras-related GTP-binding protein A.
   
 0.595
IL4
Interleukin-4; Participates in at least several B-cell activation processes as well as of other cell types. It is a costimulator of DNA-synthesis. It induces the expression of class II MHC molecules on resting B-cells. It enhances both secretion and cell surface expression of IgE and IgG1. It also regulates the expression of the low affinity Fc receptor for IgE (CD23) on both lymphocytes and monocytes. Belongs to the IL-4/IL-13 family.
   
 0.592
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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