STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTDC1Glycosyltransferase-like domain-containing protein 1. (454 aa)    
Predicted Functional Partners:
MMADHC
Methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X1.
      
 0.783
ARHGAP15
Rho GTPase-activating protein 15.
     
 0.779
ENSEEUP00000013631
annotation not available
      
 0.766
LYPD6B
ly6/PLAUR domain-containing protein 6B.
      
 0.756
ORC4
Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family.
      
 0.718
ENSEEUP00000008553
annotation not available
      
 0.711
AK9
Adenylate kinase 9.
    
  0.710
ENSEEUP00000007878
annotation not available
    
  0.710
EPC2
Enhancer of polycomb homolog.
    
 
 0.667
ENSEEUP00000002048
annotation not available
    
 
 0.650
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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