STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC29Leucine-rich repeat-containing protein 29. (222 aa)    
Predicted Functional Partners:
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.702
ENSEEUP00000003026
annotation not available
    
 0.702
ENSEEUP00000013640
annotation not available
    
 0.702
ENSEEUP00000000492
annotation not available
   
 0.700
ELOC
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.700
ENSEEUP00000010893
annotation not available
   
 0.700
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.700
ENSEEUP00000013426
annotation not available
   
 0.700
CRY1
Cryptochrome circadian regulator 1.
    
 0.650
CRY2
Cryptochrome-2.
    
 0.650
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.