STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (243 aa)    
Predicted Functional Partners:
RPL7A
60S ribosomal protein L7a.
  
 0.999
RPL6
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 
 0.999
ENSEEUP00000000320
annotation not available
  
 
 0.999
RPL30
60S ribosomal protein L30.
   
 
 0.999
MRPS9
28S ribosomal protein S9, mitochondrial.
  
 
 0.999
ENSEEUP00000001016
annotation not available
  
 
 0.999
TUFM
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.999
RPS23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
ENSEEUP00000001848
annotation not available
  
 0.999
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.999
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.