STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEPDC7DEP domain-containing protein 7. (500 aa)    
Predicted Functional Partners:
ENSEEUP00000009891
annotation not available
 
    
 0.812
RASL10B
Ras-like protein family member 10B isoform X1.
      
 0.767
RASL11B
Ras-like protein family member 11B.
      
 0.729
KRT23
Keratin, type I cytoskeletal 23; Belongs to the intermediate filament family.
      
 0.726
TMEM47
Transmembrane protein 47.
      
 0.709
SLC5A2
Solute carrier family 5 member 2.
      
 0.687
ACTR6
Actin-related protein 6; Belongs to the actin family.
   
  
 0.663
SLC13A5
Solute carrier family 13 member 5.
      
 0.655
SLC6A2
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.622
QSER1
Glutamine and serine-rich protein 1.
      
 0.616
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.