STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB8BRas-related protein Rab-8B. (165 aa)    
Predicted Functional Partners:
RILPL2
RILP-like protein 2.
    
 
 0.999
ENSEEUP00000004094
annotation not available
   
 
 0.999
RAB3IP
rab-3A-interacting protein isoform X1.
    
 0.989
SMCR8
Smith-Magenis syndrome chromosomal region candidate gene 8 protein.
    
 0.935
OCRL
Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.
    
 
 0.935
TBC1D1
TBC1 domain family member 1.
    
 0.928
RAB3IL1
Guanine nucleotide exchange factor for Rab-3A isoform X1.
    
 0.928
WDR41
WD repeat-containing protein 41.
     
 0.923
SLC2A4
Solute carrier family 2, facilitated glucose transporter member 4 isoform X1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.921
OPTN
Optineurin.
     
 0.920
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.