STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H13Zinc finger CCCH domain-containing protein 13 isoform X1. (1596 aa)    
Predicted Functional Partners:
METTL14
N6-adenosine-methyltransferase subunit METTL14; Belongs to the MT-A70-like family.
   
 
 0.999
LOC103128292
LOW QUALITY PROTEIN: pre-mRNA-splicing regulator WTAP.
    
 
 0.999
VIRMA
Vir like m6A methyltransferase associated.
   
 
 0.999
ENSEEUP00000011153
annotation not available
   
 0.960
ENSEEUP00000001587
annotation not available
   
 0.954
THOC7
THO complex subunit 7 homolog.
   
 0.948
METTL3
N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family.
    
 
 0.946
DHX16
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.
   
 0.939
ENSEEUP00000010964
annotation not available
   
 0.933
DDX39A
ATP-dependent RNA helicase DDX39A.
   
 0.933
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.