STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCN12Epididymal-specific lipocalin-12; Belongs to the calycin superfamily. Lipocalin family. (253 aa)    
Predicted Functional Partners:
ENSEEUP00000003319
annotation not available
    
 0.726
PAF1
RNA polymerase II-associated factor 1 homolog isoform X1.
    
  0.714
LCN9
Epididymal-specific lipocalin-9; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.705
ENSEEUP00000004115
annotation not available
   
 
 0.705
LCN8
Epididymal-specific lipocalin-8; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.698
ENSEEUP00000003085
annotation not available
    
 0.644
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.644
LCN6
Epididymal-specific lipocalin-6; Belongs to the calycin superfamily. Lipocalin family.
      
 0.635
GDPD3
Glycerophosphodiester phosphodiesterase domain-containing protein 3 isoform X1.
      
 0.635
C8B
Complement component C8 beta chain.
   
 0.632
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.