STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C18orf21UPF0711 protein C18orf21 homolog isoform X1. (221 aa)    
Predicted Functional Partners:
RPRD1A
Regulation of nuclear pre-mRNA domain-containing protein 1A.
      
 0.695
POP4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
   0.592
ANKRD52
Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C.
      
 0.557
RASSF2
Ras association domain-containing protein 2.
      
 0.557
GALNT1
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.550
RPP38
Ribonuclease P protein subunit p38.
   
   0.547
POP5
POP5 homolog, ribonuclease P/MRP subunit.
    
   0.539
MOCOS
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
      
 0.531
RNF41
E3 ubiquitin-protein ligase NRDP1.
      
 0.529
ENSEEUP00000012615
annotation not available
      
 0.529
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.