STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL5A2Collagen alpha-2(V) chain. (1464 aa)    
Predicted Functional Partners:
COL3A1
Collagen alpha-1(III) chain.
  
 
0.970
COL1A2
Collagen alpha-2(I) chain.
  
0.955
COL11A2
Collagen alpha-2(XI) chain isoform X1.
  
0.942
COL5A1
Collagen alpha-1(V) chain isoform X1.
  
0.942
COL11A1
Collagen alpha-1(XI) chain isoform X2.
  
0.937
COL1A1
Collagen alpha-1(I) chain.
  
 
0.933
FBN1
Fibrillin-1.
   
 0.917
ENSEEUP00000002992
annotation not available
   
 0.822
ENSEEUP00000014503
annotation not available
    
 0.806
DVL3
Segment polarity protein dishevelled homolog DVL-3 isoform X1.
     
 0.802
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.