STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBL3Ubiquitin-like protein. (116 aa)    
Predicted Functional Partners:
OGFR
Opioid growth factor receptor.
      
 0.530
NEDD8
NEDD8.
      
 0.495
SUMO1
Small ubiquitin-related modifier.
      
 0.469
HERC5
E3 ISG15--protein ligase HERC5.
      
 0.468
OTUD4
OTU domain-containing protein 4.
      
 0.465
UNC79
Protein unc-79 homolog isoform X2.
      
 0.442
SACS
Sacsin.
      
 0.433
ST13
Hsc70-interacting protein isoform X1.
 
    
 0.417
ENSEEUP00000007839
annotation not available
      
 0.410
ENSEEUP00000001056
annotation not available
      
 0.403
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.