Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSEEUP00000012819 | SF3B1 | ENSEEUP00000012819 | ENSEEUP00000000745 | annotation not available | Splicing factor 3B subunit 1 isoform X1. | 0.999 |
ENSEEUP00000012819 | SF3B3 | ENSEEUP00000012819 | ENSEEUP00000014268 | annotation not available | Splicing factor 3B subunit 3. | 0.999 |
ENSEEUP00000012819 | SNRNP70 | ENSEEUP00000012819 | ENSEEUP00000005173 | annotation not available | U1 small nuclear ribonucleoprotein 70 kDa. | 0.661 |
ENSEEUP00000012819 | SNRPA | ENSEEUP00000012819 | ENSEEUP00000013817 | annotation not available | U1 small nuclear ribonucleoprotein A isoform X1. | 0.971 |
ENSEEUP00000012819 | SNRPA1 | ENSEEUP00000012819 | ENSEEUP00000004032 | annotation not available | LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein A. | 0.967 |
ENSEEUP00000012819 | SNRPC | ENSEEUP00000012819 | ENSEEUP00000013348 | annotation not available | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] | 0.769 |
ENSEEUP00000012819 | SNRPD1 | ENSEEUP00000012819 | ENSEEUP00000004528 | annotation not available | Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. | 0.962 |
ENSEEUP00000012819 | SNRPD3 | ENSEEUP00000012819 | ENSEEUP00000014155 | annotation not available | Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. | 0.950 |
ENSEEUP00000012819 | SNRPE | ENSEEUP00000012819 | ENSEEUP00000005629 | annotation not available | Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. | 0.989 |
ENSEEUP00000012819 | SNRPF | ENSEEUP00000012819 | ENSEEUP00000012303 | annotation not available | Small nuclear ribonucleoprotein F. | 0.971 |
SF3B1 | ENSEEUP00000012819 | ENSEEUP00000000745 | ENSEEUP00000012819 | Splicing factor 3B subunit 1 isoform X1. | annotation not available | 0.999 |
SF3B1 | SF3B3 | ENSEEUP00000000745 | ENSEEUP00000014268 | Splicing factor 3B subunit 1 isoform X1. | Splicing factor 3B subunit 3. | 0.999 |
SF3B1 | SNRNP70 | ENSEEUP00000000745 | ENSEEUP00000005173 | Splicing factor 3B subunit 1 isoform X1. | U1 small nuclear ribonucleoprotein 70 kDa. | 0.918 |
SF3B1 | SNRPA | ENSEEUP00000000745 | ENSEEUP00000013817 | Splicing factor 3B subunit 1 isoform X1. | U1 small nuclear ribonucleoprotein A isoform X1. | 0.971 |
SF3B1 | SNRPA1 | ENSEEUP00000000745 | ENSEEUP00000004032 | Splicing factor 3B subunit 1 isoform X1. | LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein A. | 0.995 |
SF3B1 | SNRPC | ENSEEUP00000000745 | ENSEEUP00000013348 | Splicing factor 3B subunit 1 isoform X1. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] | 0.983 |
SF3B1 | SNRPD1 | ENSEEUP00000000745 | ENSEEUP00000004528 | Splicing factor 3B subunit 1 isoform X1. | Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. | 0.982 |
SF3B1 | SNRPD3 | ENSEEUP00000000745 | ENSEEUP00000014155 | Splicing factor 3B subunit 1 isoform X1. | Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. | 0.978 |
SF3B1 | SNRPE | ENSEEUP00000000745 | ENSEEUP00000005629 | Splicing factor 3B subunit 1 isoform X1. | Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. | 0.986 |
SF3B1 | SNRPF | ENSEEUP00000000745 | ENSEEUP00000012303 | Splicing factor 3B subunit 1 isoform X1. | Small nuclear ribonucleoprotein F. | 0.987 |
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