STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMA5LOW QUALITY PROTEIN: laminin subunit alpha-5. (3586 aa)    
Predicted Functional Partners:
LAMC1
Laminin subunit gamma-1.
   
0.968
ITGA6
Integrin alpha-6 isoform X1; Belongs to the integrin alpha chain family.
    
 0.962
ENSEEUP00000011627
annotation not available
   
0.949
ITGA7
Integrin subunit alpha 7.
    
 0.946
ENSEEUP00000007667
annotation not available
    
 0.939
ITGA3
Integrin alpha-3 isoform X1; Belongs to the integrin alpha chain family.
    
 0.937
ITGB4
Integrin beta.
   
 0.931
LAMB1
Laminin subunit beta-1.
   
0.914
ITGA8
Integrin alpha-8; Belongs to the integrin alpha chain family.
    
 0.910
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.908
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (22%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.