STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAF4TNF receptor-associated factor. (422 aa)    
Predicted Functional Partners:
ENSEEUP00000007889
annotation not available
    
 0.843
TRADD
Tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1.
    
 0.829
LOC103107805
Serine/threonine-protein kinase/endoribonuclease IRE2-like.
    
 0.810
MIB2
E3 ubiquitin-protein ligase MIB2 isoform X3.
    
 0.798
MAP3K5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.781
MAP3K6
Mitogen-activated protein kinase kinase kinase 6 isoform X1.
    
 0.781
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
 0.773
TMEM189-UBE2V1
Transmembrane protein 189 isoform X1.
    
 0.770
ZFAND4
AN1-type zinc finger protein 4 isoform X1.
    
 0.746
IRAK2
Interleukin-1 receptor-associated kinase-like 2.
   
 0.745
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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