Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EJZ69657.1 | EJZ69659.1 | HMPREF1135_01846 | HMPREF1135_01848 | Exonuclease, DNA polymerase III, epsilon subunit. | CRISPR-associated protein cas6/cse3/case, subtype I-e. | 0.954 |
| EJZ69657.1 | EJZ69660.1 | HMPREF1135_01846 | HMPREF1135_01849 | Exonuclease, DNA polymerase III, epsilon subunit. | CRISPR-associated protein cas5/casd, subtype I-e. | 0.949 |
| EJZ69657.1 | EJZ69661.1 | HMPREF1135_01846 | HMPREF1135_01850 | Exonuclease, DNA polymerase III, epsilon subunit. | CRISPR-associated protein cas7/cse4/casc, subtype I-e. | 0.951 |
| EJZ69657.1 | EJZ69662.1 | HMPREF1135_01846 | HMPREF1135_01851 | Exonuclease, DNA polymerase III, epsilon subunit. | CRISPR type I-e/-associated protein casb/cse2. | 0.948 |
| EJZ69657.1 | EJZ69663.1 | HMPREF1135_01846 | HMPREF1135_01852 | Exonuclease, DNA polymerase III, epsilon subunit. | Hypothetical protein. | 0.945 |
| EJZ69657.1 | EJZ69664.1 | HMPREF1135_01846 | HMPREF1135_01853 | Exonuclease, DNA polymerase III, epsilon subunit. | CRISPR-associated helicase cas3. | 0.945 |
| EJZ69657.1 | cas1 | HMPREF1135_01846 | HMPREF1135_01847 | Exonuclease, DNA polymerase III, epsilon subunit. | CRISPR-associated endonuclease cas1, subtype I-e; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. | 0.951 |
| EJZ69659.1 | EJZ69657.1 | HMPREF1135_01848 | HMPREF1135_01846 | CRISPR-associated protein cas6/cse3/case, subtype I-e. | Exonuclease, DNA polymerase III, epsilon subunit. | 0.954 |
| EJZ69659.1 | EJZ69660.1 | HMPREF1135_01848 | HMPREF1135_01849 | CRISPR-associated protein cas6/cse3/case, subtype I-e. | CRISPR-associated protein cas5/casd, subtype I-e. | 0.998 |
| EJZ69659.1 | EJZ69661.1 | HMPREF1135_01848 | HMPREF1135_01850 | CRISPR-associated protein cas6/cse3/case, subtype I-e. | CRISPR-associated protein cas7/cse4/casc, subtype I-e. | 0.998 |
| EJZ69659.1 | EJZ69662.1 | HMPREF1135_01848 | HMPREF1135_01851 | CRISPR-associated protein cas6/cse3/case, subtype I-e. | CRISPR type I-e/-associated protein casb/cse2. | 0.998 |
| EJZ69659.1 | EJZ69663.1 | HMPREF1135_01848 | HMPREF1135_01852 | CRISPR-associated protein cas6/cse3/case, subtype I-e. | Hypothetical protein. | 0.997 |
| EJZ69659.1 | EJZ69664.1 | HMPREF1135_01848 | HMPREF1135_01853 | CRISPR-associated protein cas6/cse3/case, subtype I-e. | CRISPR-associated helicase cas3. | 0.997 |
| EJZ69659.1 | EJZ69665.1 | HMPREF1135_01848 | HMPREF1135_01854 | CRISPR-associated protein cas6/cse3/case, subtype I-e. | Hypothetical protein. | 0.400 |
| EJZ69659.1 | cas1 | HMPREF1135_01848 | HMPREF1135_01847 | CRISPR-associated protein cas6/cse3/case, subtype I-e. | CRISPR-associated endonuclease cas1, subtype I-e; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. | 0.968 |
| EJZ69660.1 | EJZ69657.1 | HMPREF1135_01849 | HMPREF1135_01846 | CRISPR-associated protein cas5/casd, subtype I-e. | Exonuclease, DNA polymerase III, epsilon subunit. | 0.949 |
| EJZ69660.1 | EJZ69659.1 | HMPREF1135_01849 | HMPREF1135_01848 | CRISPR-associated protein cas5/casd, subtype I-e. | CRISPR-associated protein cas6/cse3/case, subtype I-e. | 0.998 |
| EJZ69660.1 | EJZ69661.1 | HMPREF1135_01849 | HMPREF1135_01850 | CRISPR-associated protein cas5/casd, subtype I-e. | CRISPR-associated protein cas7/cse4/casc, subtype I-e. | 0.999 |
| EJZ69660.1 | EJZ69662.1 | HMPREF1135_01849 | HMPREF1135_01851 | CRISPR-associated protein cas5/casd, subtype I-e. | CRISPR type I-e/-associated protein casb/cse2. | 0.998 |
| EJZ69660.1 | EJZ69663.1 | HMPREF1135_01849 | HMPREF1135_01852 | CRISPR-associated protein cas5/casd, subtype I-e. | Hypothetical protein. | 0.999 |
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