STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR44WD repeat domain 44. (849 aa)    
Predicted Functional Partners:
AQR
Aquarius intron-binding spliceosomal factor.
      
 0.618
ENSETEP00000004903
annotation not available
      
 0.618
VAPB
VAMP associated protein B and C.
   
 
 0.618
VAPA
VAMP associated protein A.
   
 
 0.580
ENSETEP00000009020
annotation not available
      
 0.534
ENSETEP00000010394
annotation not available
      
 0.533
ENSETEP00000002350
annotation not available
   
  
 0.527
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.495
ENSETEP00000009700
annotation not available
      
 0.469
KANSL2
KAT8 regulatory NSL complex subunit 2.
      
 0.439
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.