STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLSTN3Calsyntenin 3. (957 aa)    
Predicted Functional Partners:
SH3BP5L
SH3 binding domain protein 5 like.
      
 0.566
ERP27
Endoplasmic reticulum protein 27.
      
 0.537
USP5
Ubiquitin specific peptidase 5.
      
 0.535
APLP2
Amyloid beta precursor like protein 2.
   
 
 0.468
PEX5
Peroxisomal biogenesis factor 5.
   
  
 0.438
S100B
S100 calcium binding protein B.
   
  
 0.436
APBA2
Amyloid beta precursor protein binding family A member 2.
   
 
 0.435
CXorf38
Chromosome X open reading frame 38.
    
 
 0.429
ENSETEP00000003698
annotation not available
    
 
 0.429
KLC4
Kinesin light chain 4.
    
 
 0.429
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.