STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCD4ATP binding cassette subfamily D member 4. (463 aa)    
Predicted Functional Partners:
LMBRD1
LMBR1 domain containing 1.
    
 0.947
RAD51
RAD51 recombinase.
    
 
 0.930
ABCD2
ATP binding cassette subfamily D member 2.
   
0.891
ENSETEP00000006871
annotation not available
    
 0.873
ENSETEP00000010446
annotation not available
    
 0.873
RAD51B
RAD51 paralog B.
    
 
 0.859
RAD51D
RAD51 paralog D.
    
 
 0.859
PEX3
Peroxisomal biogenesis factor 3.
   
 0.834
ABCD3
ATP binding cassette subfamily D member 3.
     
0.793
PEX14
Peroxisomal biogenesis factor 14.
   
 0.769
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.