STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZD9PDZ domain containing 9. (194 aa)    
Predicted Functional Partners:
CEP152
Centrosomal protein 152.
      
 0.538
OR51D1
Olfactory receptor family 51 subfamily D member 1.
      
 0.536
ENSETEP00000012905
annotation not available
      
 0.517
ENSETEP00000010860
annotation not available
  
     0.446
ENSETEP00000007412
annotation not available
      
 0.436
ENSETEP00000007893
annotation not available
      
 0.405
ENSETEP00000007897
annotation not available
      
 0.405
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.