Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RHOBTB1Rho related BTB domain containing 1. (693 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.966
ITSN2
Intersectin 2.
    
 0.930
KLHL13
Kelch like family member 13.
    
  0.920
ENSETEP00000015734
annotation not available
    
  0.920
RHOBTB2
Rho related BTB domain containing 2.
  
  
 
0.901
ENSETEP00000011279
annotation not available
    
  0.892
ENSETEP00000004889
annotation not available
    
 0.869
TRIO
Trio Rho guanine nucleotide exchange factor.
    
 0.869
ENSETEP00000005414
annotation not available
   
   0.857
APBB3
Amyloid beta precursor protein binding family B member 3.
   
  0.855
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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