STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLDCGlycine decarboxylase. (1030 aa)    
Predicted Functional Partners:
AMT
Aminomethyltransferase.
 0.999
ENSETEP00000002890
annotation not available
  
 0.988
SHMT1
Serine hydroxymethyltransferase 1.
  
 
 0.988
SHMT2
Serine hydroxymethyltransferase 2.
  
 
 0.988
ENSETEP00000000564
annotation not available
 
 0.985
ENSETEP00000008112
annotation not available
 
 0.985
ENSETEP00000015019
annotation not available
 
 0.985
ENSETEP00000016344
annotation not available
  
 0.980
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.975
DMGDH
Dimethylglycine dehydrogenase.
  
 0.975
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.