STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX6Paired box 6. (436 aa)    
Predicted Functional Partners:
NEUROD1
Neuronal differentiation 1.
   
 
 0.756
CREBBP
CREB binding protein.
    
 0.696
EP300
E1A binding protein p300.
    
 0.680
PDX1
Pancreatic and duodenal homeobox 1.
   
0.674
ENSETEP00000002553
annotation not available
    
 0.656
ENSETEP00000013997
annotation not available
    
 0.656
NEUROG3
Neurogenin 3.
   
 
 0.653
ENSETEP00000006849
annotation not available
    
 0.644
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.635
SOX17
SRY-box transcription factor 17.
   
 
 0.630
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.