STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIGNL1Fidgetin like 1. (672 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.985
IST1
IST1 factor associated with ESCRT-III.
    
 0.919
ENSETEP00000013439
annotation not available
   
 0.877
ENSETEP00000014340
annotation not available
   
 0.858
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.857
YOD1
YOD1 deubiquitinase.
   
 0.825
UBXN1
UBX domain protein 1.
    
 0.807
ENSETEP00000003179
annotation not available
    
 0.795
NAPA
NSF attachment protein alpha.
    
 0.795
ENSETEP00000007444
annotation not available
    
 0.788
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.