STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHGAChromogranin A. (385 aa)    
Predicted Functional Partners:
CHGB
Chromogranin B.
   
 
 0.962
SCG3
Secretogranin III.
   
  
 0.684
SST
Somatostatin.
   
  
 0.601
ENSETEP00000007443
annotation not available
      
 0.538
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
      
 0.538
ENSETEP00000004050
annotation not available
      
 0.535
TPH1
Tryptophan hydroxylase 1.
   
  
 0.535
GHRL
Ghrelin and obestatin prepropeptide.
      
 0.535
ENSETEP00000014115
annotation not available
      
 0.534
CPE
Carboxypeptidase E.
      
 0.505
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.