STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSETEP00000003642annotation not available (4540 aa)    
Predicted Functional Partners:
LPL
Lipoprotein lipase.
    
 0.942
LRP2
LDL receptor related protein 2.
     
0.896
ENSETEP00000006733
annotation not available
    
 0.891
DKK1
Dickkopf WNT signaling pathway inhibitor 1.
    
 0.883
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.871
ENSETEP00000012575
annotation not available
    
 0.827
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.818
RELN
Reelin.
    
 0.813
ENSETEP00000013027
annotation not available
    
 0.798
ENSETEP00000006227
annotation not available
    
 0.792
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.