STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABARAPGABA type A receptor-associated protein. (117 aa)    
Predicted Functional Partners:
ATG4A
Autophagy related 4A cysteine peptidase.
   
 0.997
ATG3
Autophagy related 3.
  
 0.996
ATG7
Autophagy related 7.
   
 0.996
ENSETEP00000001528
annotation not available
    
 0.994
ATG4D
Autophagy related 4D cysteine peptidase.
   
 0.980
ENSETEP00000007149
annotation not available
   
 0.980
ATG12
Autophagy related 12.
   
 0.977
ATG5
Autophagy related 5.
   
 0.971
GABRG2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
    
 0.969
GABRG1
Gamma-aminobutyric acid type A receptor gamma1 subunit.
    
 0.969
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.